« Previous
Next »
Molecular Oncology
Volume 2, Issue 4
, Pages 327-339
, December 2008
CAMK1D amplification implicated in epithelial–mesenchymal transition in basal-like breast cancer
References
- . Distinct patterns of DNA copy number alteration are associated with different clinicopathological features and gene-expression subtypes of breast cancer. Genes Chromosomes Cancer. 2006;45:1033–1040
- . Evidence of progenitor cells of glandular and myoepithelial cell lineages in the human adult female breast epithelium: a new progenitor (adult stem) cell concept. Cell Prolif. 2003;36(Suppl. 1):73–84
- Race, breast cancer subtypes, and survival in the Carolina Breast Cancer Study. JAMA. 2006;295:2492–2502
- Genomic and transcriptional aberrations linked to breast cancer pathophysiologies. Cancer Cell. 2006;10:529–541
- The Stanford Microarray Database: implementation of new analysis tools and open source release of software. Nucleic Acids Res. 2007;35:D766–D770
- . Influence of TP53 gene alterations and c-erbB-2 expression on the response to treatment with doxorubicin in locally advanced breast cancer. Cancer Res. 2001;61:2505–2512
- . TP53 gene mutations predict the response to neoadjuvant treatment with 5-fluorouracil and mitomycin in locally advanced breast cancer. Clin. Cancer Res. 2003;9:5582–5588
- . Inducible regulatory elements in the human cyclin D1 promoter. Oncogene. 1994;9:1295–1304
- Novel patterns of genome rearrangement and their association with survival in breast cancer. Genome Res. 2006;16:1465–1479
- . Ca(2+)/CaM-dependent kinases: from activation to function. Annu. Rev. Pharmacol. Toxicol. 2001;41:471–505
- . Identification and characterization of novel components of a Ca2+/calmodulin-dependent protein kinase cascade in HeLa cells. FEBS Lett. 2003;550:57–63
- . Cancer statistics, 2007. CA Cancer J. Clin. 2007;57:43–66
- . Regulation of cyclin D1/Cdk4 complexes by calcium/calmodulin-dependent protein kinase I. J. Biol. Chem. 2004;279:15411–15419
- . Discovery and validation of breast cancer subtypes. BMC Genomics. 2006;7:231
- Kreike, B., van Kouwenhove, M., Horlings, H., Weigelt, B., Bartelink, H., Van de Vijver, M.J., 2007. Gene expression profiling and histopathological characterization of triple negative/basal-like breast carcinomas. Breast Cancer Res. 9, R65.
- . SIRAC: supervised identification of regions of aberration in aCGH datasets. BMC Bioinform. 2007;8:422
- Langerod, A., Zhao, H., Borgan, O., Nesland, J.M., Bukholm, I.R., Ikdahl, T., Karesen, R., Borresen-Dale, A.L., Jeffrey, S.S., 2007. TP53 mutation status and gene expression profiles are powerful prognostic markers of breast cancer. Breast Cancer Res. 9, R30.
- . Analysis of relative gene expression data using real-time quantitative PCR and the 2(−Delta Delta C(T)) Method. Methods. 2001;25:402–408
- . Tissue microarray analysis of neuroendocrine differentiation and its prognostic significance in breast cancer. Hum. Pathol. 2003;34:1001–1008
- Molecular portraits of human breast tumours. Nature. 2000;406:747–752
- . Genome-wide analysis of DNA copy-number changes using cDNA microarrays. Nat. Genet. 1999;23:41–46
- . Microarray analysis reveals a major direct role of DNA copy number alteration in the transcriptional program of human breast tumors. Proc. Natl. Acad. Sci. USA. 2002;99:12963–12968
- . NCBI reference sequence project: update and current status. Nucleic Acids Res. 2003;31:34–37
- . Calcium/calmodulin-dependent kinase I and calcium/calmodulin-dependent kinase kinase participate in the control of cell cycle progression in MCF-7 human breast cancer cells. Cancer Res. 2005;65:5408–5416
- . A comparison of gene expression signatures from breast tumors and breast tissue derived cell lines. Dis Markers. 2001;17:99–109
- . Rational therapeutic intervention in cancer: kinases as drug targets. Curr. Opin. Genet. Dev. 2002;12:111–115
- . Pieces of the puzzle: expressed sequence tags and the catalog of human genes. J. Mol. Med. 1997;75:694–698
- . CREB: a stimulus-induced transcription factor activated by a diverse array of extracellular signals. Annu. Rev. Biochem. 1999;68:821–861
- . The Ca-calmodulin-dependent protein kinase cascade. Trends Biochem. Sci. 1999;24:232–236
- Gene expression patterns of breast carcinomas distinguish tumor subclasses with clinical implications. Proc. Natl. Acad. Sci. USA. 2001;98:10869–10874
- Repeated observation of breast tumor subtypes in independent gene expression data sets. Proc. Natl. Acad. Sci. USA. 2003;100:8418–8423
- . Utilizing prognostic and predictive factors in breast cancer. Curr. Treat. Options Oncol. 2005;6:147–159
- Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles. Proc. Natl. Acad. Sci. USA. 2005;102:15545–15550
- . GSEA-P: a desktop application for Gene Set Enrichment Analysis. Bioinformatics. 2007;23(23):3251–3253
- . Epithelial–mesenchymal transitions in tumour progression. Nat. Rev. Cancer. 2002;2:442–454
- . Carcinoma invasion and metastasis: a role for epithelial–mesenchymal transition?. Cancer Res. 2005;65:5991–5995discussion 5995
- . Identification and characterization of CKLiK, a novel granulocyte Ca(++)/calmodulin-dependent kinase. Blood. 2000;96:3215–3223
- . Characterization of the role of CaMKI-like kinase (CKLiK) in human granulocyte function. Blood. 2005;106:1076–1083
- . A method for calling gains and losses in array CGH data. Biostatistics. 2005;6:45–58
- Different gene expression patterns in invasive lobular and ductal carcinomas of the breast. Mol. Biol. Cell. 2004;15:2523–2536
PII: S1574-7891(08)00124-5
doi: 10.1016/j.molonc.2008.09.004
© 2008 Federation of European Biochemical Societies. Published by Elsevier Inc. All rights reserved.
« Previous
Next »
Molecular Oncology
Volume 2, Issue 4
, Pages 327-339
, December 2008

